Work with semantic and linked data technologies
Installation of the Virtuoso Universal Server for use
as a triplestore and SparQL endpoint. Also installed the GO, Bind,
NCI-NC, and Reactome components downloaded from Bio2RDF.
- Some presentations concerning the semantic web and related technologies
Installation of a D2R gateway exposing a portion of the local Centralized
Life Sciences Data (CLSD) service as Linked Data, and also via a SparQL
Use of several Linked data clients, such as the Tabulator, the
Explorator, Twinkle, RDF-Gravity, etc.
Explored several tools for searching PubMed: GOPubMed, Texflame, and
the Enju Natural Language parser, for possible use on our CTSI hub.
Some other work:
- Some scripts were written display semantic data using the Exhibit
faceted browsing middleware from the MIT Simile project.
An example MAY still be available